BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F09SP1|AL427934
(1081 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 2085 0.0
>3x_Contig1313
Length = 8010
Score = 2085 bits (1050), Expect = 0.0
Identities = 1068/1074 (99%), Gaps = 1/1074 (0%)
Strand = Plus / Minus
Query: 1 atcgtcttgccaactgacttcgtcattggtgacaagttctctgctgatgctaacacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5834 atcgtcttgccaactgacttcgtcattggtgacaagttctctgctgatgctaacacaaag 5775
Query: 61 gttgtcaccgacaaggaaggtattccaagcggctggcaagggttggacaacggtccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5774 gttgtcaccgacaaggaaggtattccaagcggctggcaagggttggacaacggtccagaa 5715
Query: 121 tctagaaaggctttcgctgccactgttgctgaagctaagactatcgtctggaacggtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5714 tctagaaaggctttcgctgccactgttgctgaagctaagactatcgtctggaacggtcca 5655
Query: 181 ccaggtgtcttcgaatttgctcctttcgctaagggtaccgaaagctctattggacgccgt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5654 ccaggtgtcttcgaatttgctcctttcgctaagggtaccgaa-gctctattggacgccgt 5596
Query: 241 tgtcgcctcctctcaagctggtaacaccgtcatcatcggtggtggtgacaccgctaccgt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5595 tgtcgcctcctgtcaagctggtaacaccgtcatcatcggtggtggtgacaccgctaccgt 5536
Query: 301 cgccaagaagtacggtgtcgtcgacaagatctctcacgtctccactggtggtggtgcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5535 cgccaagaagtacggtgtcgtcgacaagatctctcacgtctccactggtggtggtgcttc 5476
Query: 361 tttggaattgttggaaggtaaagaattgcctggtgtcactttcttgtccaacaagcaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5475 tttggaattgttggaaggtaaagaattgcctggtgtcactttcttgtccaacaagcaata 5416
Query: 421 aatgtaggatccatcatcccttcccttcttgtttcctacatttttccacttatgtaatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5415 aatgtaggatccatcatcccttcccttcttgtttcctacatttttccacttatgtaatga 5356
Query: 481 gcatcttatgatttaaaagctccacataaatttaactttttatgatacataattactttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5355 gcatcttatgatttaaaagctccacataaatttaactttttatgatacataattactttc 5296
Query: 541 tttaatatcaagaccaaaaacgtatagattcatggaattgttacaaccccaaacgctagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5295 tttaatatcaagaccaaaaacgtatagattcatggaattgttacaaccccaaacgctagc 5236
Query: 601 atgaaaataaatatgtactgtatttatgctatacgagagcagtgaggggcattacaaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5235 atgaaaataaatatgtactgtatttatgctatacgagagcagtgaggggcattacaaatt 5176
Query: 661 cctctcagtgggtttgagtttatctaccccaatcatatcaaggatttcatattcgtccgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5175 cctctcagtgggtttgagtttatctaccccaatcatatcaaggatttcatattcgtccgc 5116
Query: 721 aacaggtatcaattgtccatccttgtatatcccatcgttacttagtacgtatcctttttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 aacaggtatcaattgtccatccttgtatatcccatcgttacttagtacgtatcctttttg 5056
Query: 781 tttggcaattgtcctacattttttgttgaaattgttattaccagtgaaatacacattagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 tttggcaattgtcctacattttttgttgaaattgttattaccagtgaaatacacattagt 4996
Query: 841 ggcaccgaggccttgatattcagctaataagaaatctactcggcggcaagttttaccaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4995 ggcaccgaggccttgatattcagctaataagaaatctactcggcggcaagttttaccaat 4936
Query: 901 atccattttatacttcttgtcgttcccttttaaagttaaagcatctgcatctttgattct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4935 atccattttatacttcttgtcgttcccttttaaagttaaagcatctgcatctttgattct 4876
Query: 961 gtccggttcatatttggtgacagcagcmccgcaatagaacttgtgcmctggttcatcgta 1020
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 4875 gtccggttcatatttggtgacagcagcaccgcaatagaacttgtgcactggttcatcgta 4816
Query: 1021 ggctttgacgtcaaatggtttgttgaaatgagaaaataatttgtgggaccatgg 1074
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4815 agctttgacgtcaaatggtttgttgaaatgagaaaataatttgtggaaccatgg 4762
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7708
Number of Sequences: 1807
Number of extensions: 7708
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 1081
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1065
effective length of database: 10,329,639
effective search space: 11001065535
effective search space used: 11001065535
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.8 bits)